3/15/2024 0 Comments Fiji is imagej![]() V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets. Peng, H., Ruan, Z., Long, F., Simpson, J.H. CellProfiler: image analysis software for identifying and quantifying cell phenotypes. Bioimage informatics: a new area of engineering biology. Open source bioimage informatics for cell biology. BrainAligner: 3D registration atlases of Drosophila brains. elegans and its application to single-cell analyses. Automated cell lineage tracing in Caenorhabditis elegans. Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution. ![]() Automated analysis of embryonic gene expression with cellular resolution in C. As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets. Saalfeld, S., Cardona, A., Hartenstein, V. A computational framework for ultrastructural mapping of neural circuitry. A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm. Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy. ![]() Keller, P.J., Schmidt, A.D., Wittbrodt, J. Automated image analysis for high-content screening and analysis. ![]() Shariff, A., Kangas, J., Coelho, L.P., Quinn, S. Systems survey of endocytosis by multiparametric image analysis. Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes. ![]()
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